官方安装文档:

GitHub - jinworks/CellChat: R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

我安装过的命令:

install.packages("devtools")
install.packages('NMF')
devtools::install_github("jokergoo/circlize")
devtools::install_github("jokergoo/ComplexHeatmap")
devtools::install_github("immunogenomics/presto")
BiocManager::install("BiocNeighbors")
devtools::install_github("jinworks/CellChat")

参考的链接:(很详细)

CellChat三部曲1:使用CellChat对单个数据集进行细胞间通讯分析-腾讯云开发者社区-腾讯云 (tencent.com)

Logo

有“AI”的1024 = 2048,欢迎大家加入2048 AI社区

更多推荐